Master thesis @ DEI
Marco Marangia, “Simulazione di geni differenzialmente espressi in esperimenti di sequenziamento di RNA a singola cellula”
Master Degree in Bioengineering, A.Y. 2020-2021
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Marco Donà, “A graphical user interface for single-cell data annotation and visualization of cell-cell interactions”
Master Degree in Computer Engineering, A.Y. 2019-2020
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Filippo Saretta, “Quantificazione e caratterizzazione delle popolazioni cellulari nei tumori tramite scRNA-sequencing”
Master Degree in Bioengineering, A.Y. 2019-2020
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Giulia Cesaro, “Inference and analysis of cell-cell communication using scRNA-seq data”
Master Degree in Bioengineering, A.Y. 2019-2020
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Marco Cappellato, “Mappatura nello spazio 2-dimensionale di cellule da dati di
sequenziamento a singola cellula”
Master Degree in Bioengineering, A.Y. 2018-2019
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Federica Corso, “Confronto di metodi per la pre-elaborazione e l’identificazione di
sottopopolazioni cellulari in dati di sequenziamento a singola cellula”
Master Degree in Bioengineering, A.Y. 2017-2018
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Tommaso Scarpa, “Computational methods to characterizemutations in cancer phylogenetic trees”
Master Degree in Computer Engineering, A.Y. 2016-2017
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Fabio Vandin
Bachelor thesis @ DEI
Alessio Lazzarini, “Simulazione e analisi dell’interazione tra cellule tumorali e del sistema immunitario tramite un modello multi-agente”
Bachelor Degree in Biomedical Engineering, A.Y. 2019-2020
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Giovanni Finco, “A cellular automata model simulating the effect of the immune
system on tumor growth”
Bachelor Degree in Information Engineering, A.Y. 2017-2018
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Francesco Morandin, “A cellular automata model simulating the effects of
intratumoral heterogeneity on immune response”
Bachelor Degree in Information Engineering, A.Y. 2017-2018
Department of Information Engineering, University of Padova, Padova, Italy
Supervisor: Prof. Barbara Di Camillo
Co-supervisor: Dr. Giacomo Baruzzo
Attended schools (as trainer)
WebValley 2020: Artificial Intelligence for Computational Biology, FBK Data Science Summer School for Interdisciplinary Research, 20th Edition
August 16-29, 2020, Fondazione Bruno Kessler, Trento, Italy. https://webvalley.fbk.eu/
Course: Single-Cell data simulator
Trainer: Dr. Giacomo Baruzzo
Attended schools (as student)
Analysis of single cell RNA-seq data. October 31 – November 1, University of Cambridge, UK. https://www.training.cam.ac.uk/event/2184854
3rd SYSBIO School on Computational Systems Biology. May 9-11, 2018, Rome, Italy. http://www.iasi.cnr.it/sysbioschool3/
5th International Synthetic & Systems Biology Summer School – Biology meets Engineering & Computer Science. July 25-29, 2018, Certosa di Pontignano (Siena – Tuscany) Italy. https://ssbss2018.icas.xyz/